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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13214703 chr6:27941387 A/G FGF4 chr11:69585784-69590171:- 0.38 6.06 3.18E-9 Box Plot
BLCA rs1321479 chr6:26501897 C/T ZNF322B chr9:99957633-99961910:- -0.46 -7.94 2.2E-14 Box Plot
BLCA rs1321480 chr6:26532742 A/G ZNF322B chr9:99957633-99961910:- 0.45 7.89 3.22E-14 Box Plot
BLCA rs1321481 chr6:26538210 A/T ZNF322B chr9:99957633-99961910:- 0.46 8.01 1.35E-14 Box Plot
BLCA rs13217619 chr6:28306671 T/C ZFP57 chr6:29640169-29648887:- 0.76 7.2 3.16E-12 Box Plot
BLCA rs13217984 chr6:28139710 A/T ZFP57 chr6:29640169-29648887:- 0.74 6.07 3.1E-9 Box Plot
BLCA rs1323135 chr20:1357852 A/C FKBP1AP1 chr19:58337829-58338146:- -0.58 -9.49 2.52E-19 Box Plot
BLCA rs1324049 chr13:37922897 C/G C13orf23 chr13:39584003-39612252:- 0.65 6.1 2.54E-9 Box Plot
BLCA rs13254203 chr8:3916232 A/G SSX5 chrX:48045656-48056199:- -0.52 -5.97 5.49E-9 Box Plot
BLCA rs13260727 chr8:11232860 A/G FLJ10661 chr8:8086092-8102386:+ 0.36 6.16 1.79E-9 Box Plot
BLCA rs13264212 chr8:11309849 C/T AGPAT5 chr8:6565878-6617187:+ -0.4 -6.02 4.06E-9 Box Plot
BLCA rs13264212 chr8:11309849 C/T BIN3 chr8:22477931-22526661:- -0.38 -6.19 1.51E-9 Box Plot
BLCA rs13264212 chr8:11309849 C/T CNOT7 chr8:17082473-17104387:- -0.41 -6.02 4.13E-9 Box Plot
BLCA rs13264212 chr8:11309849 C/T TNKS chr8:9413424-9639856:+ -0.36 -6.51 2.3E-10 Box Plot
BLCA rs13264212 chr8:11309849 C/T WRN chr8:30891317-31031285:+ -0.37 -6.28 9.15E-10 Box Plot